C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: INTS3 and NABP interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095063 Inip-001 ENSMUSG00000038544 10090 - 4:59769637-59783866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095063 2.532±1.68 6.487±0.71 3.236±0.01 5.589±2.48 4.417±1.20 3.869±0.85 1.867±0.46 1.755±0.61 1.828±0.94 5.100±0.56 0.662±0.11 5.770±2.13 2.615±0.72 1.510±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022E CIL_00022E_0003 CGP 4:59626211-59801589
CIL_0005X4 CIL_0005X4_0002 CGP 4:59769637-59904737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0010212 ISS response to ionizing radiation
GO:0070876 ISS SOSS complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374234 INIP-003 protein_coding Homo_sapiens 7e-38 161
ENST00000374236 INIP-002 protein_coding Homo_sapiens 0 435
ENST00000374242 INIP-001 protein_coding Homo_sapiens 0 501
ENST00000476599 INIP-006 processed_transcript Homo_sapiens 0 222
ENST00000481146 INIP-004 processed_transcript Homo_sapiens 1e-36 158
ENST00000497712 INIP-005 processed_transcript Homo_sapiens 0 435

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