C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9386
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095195 Gm9386-201 ENSMUSG00000071040 10090 - 17:80938334-80938714 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverPlacentaENSMUST00000095195
Transcript ID Bladder Brain Heart Liver Placenta
ENSMUST00000095195 0.055±0.00 0.051±0.00 0.138±0.00 0.028±0.00 0.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TC CIL_0003TC_0003 CGP 17:80580512-81001816

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079050 nutf2-001 protein_coding Danio_rerio 0 265
ENSDART00000132034 nutf2-002 protein_coding Danio_rerio 0 254
ENST00000219169 NUTF2-001 protein_coding Homo_sapiens 0 556
ENST00000448540 NUTF2P3-001 processed_pseudogene Homo_sapiens 0 412
ENST00000453086 NUTF2P7-001 processed_pseudogene Homo_sapiens 0 468
ENST00000551207 NUTF2P2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000560892 NUTF2P6-001 processed_pseudogene Homo_sapiens 0 414
ENST00000567105 NUTF2-002 protein_coding Homo_sapiens 0 475
ENST00000568233 NUTF2-007 retained_intron Homo_sapiens 0 401
ENST00000568390 NUTF2-006 retained_intron Homo_sapiens 0 255
ENST00000568396 NUTF2-004 protein_coding Homo_sapiens 0 556
ENST00000569436 NUTF2-003 protein_coding Homo_sapiens 0 556
ENST00000570026 NUTF2-005 retained_intron Homo_sapiens 0 255
ENST00000587481 NUTF2-012 retained_intron Homo_sapiens 8e-38 163
ENST00000604593 NUTF2P8-001 processed_pseudogene Homo_sapiens 0 287

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