C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560892 NUTF2P6-001 ENSG00000259710 9606 + 15:35282596-35282980 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryENST00000560892
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary
ENST00000560892 0.077±0.00 0.219±0.00 0.466±0.00 0.523±0.00 0.111±0.00 0.312±0.00 0.717±0.00 0.070±0.00 0.640±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193
CIL_0006HI CIL_0006HI_0001 CGP 15:35217345-36810248
CIL_0007MM CIL_0007MM_0001 UCNEbase 15:35253766-37880700

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179225 Gm10349-201 processed_pseudogene Mus_musculus 0 422
ENSMUST00000008594 Nutf2-201 protein_coding Mus_musculus 0 416
ENSMUST00000095978 Nutf2-ps1-201 protein_coding Mus_musculus 0 416
ENSMUST00000095195 Gm9386-201 processed_pseudogene Mus_musculus 0 414

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