C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569436 NUTF2-003 ENSG00000102898 9606 + 16:67847161-67871323 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000569436
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000569436 29.938±0.00 60.738±0.00 3.731±0.00 19.540±4.89 17.296±10.64 15.221±9.79 2.422±0.00 24.939±20.54 11.593±2.64 19.460±8.71 35.485±19.24 62.218±21.31 59.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XE CIL_0003XE_0001 CGP 16:67806765-67847811
CIL_000189 CIL_000189_0001 CGP 16:67828157-67847811
CIL_0007FR CIL_0007FR_0001 CGP 16:67842082-67872567
CIL_0007FS CIL_0007FS_0001 CGP 16:67846732-67884503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 TAS transporter activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005643 TAS nuclear pore
GO:0005829 TAS cytosol
GO:0006611 IDA protein export from nucleus
GO:0006810 IEA transport
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000008594 Nutf2-201 protein_coding Mus_musculus 0 1061
ENSMUST00000095978 Nutf2-ps1-201 protein_coding Mus_musculus 0 1014
ENSMUST00000179225 Gm10349-201 processed_pseudogene Mus_musculus 0 582
ENSMUST00000095195 Gm9386-201 processed_pseudogene Mus_musculus 0 556

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