C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 10 (sodium/bile acid cotransporter family), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095572 Slc10a1-201 ENSMUSG00000021135 10090 - 12:80953185-80968079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095572
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095572 0.097±0.05 0.514±0.13 0.117±0.01 0.127±0.03 1.122±1.11 0.099±0.07 0.125±0.09 0.270±0.09 314.706±290.02 0.164±0.12 0.032±0.01 0.178±0.07 0.094±0.03 0.088±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U3 CIL_0000U3_0002 CGP 12:80945504-80968079
CIL_0000U1 CIL_0000U1_0002 CGP 12:80953185-81186414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006814 IEA sodium ion transport
GO:0008508 IEA bile acid:sodium symporter activity
GO:0015125 IEA bile acid transmembrane transporter activity
GO:0015721 IEA bile acid and bile salt transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216540 SLC10A1-001 protein_coding Homo_sapiens 0 918

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