C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prenyl (solanesyl) diphosphate synthase, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095725 Pdss2-001 ENSMUSG00000038240 10090 + 10:43221486-43440602 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095725 4.409±1.57 2.886±0.49 5.538±0.32 4.299±1.46 2.573±1.72 6.789±1.45 6.763±1.43 9.225±0.97 3.549±1.18 2.204±0.96 6.785±0.96 3.994±1.63 3.070±1.08 1.422±0.66

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000010 IDA trans-hexaprenyltranstransferase activity
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006744 IEA ubiquinone biosynthetic process
GO:0008299 IDA isoprenoid biosynthetic process
GO:0046982 IDA protein heterodimerization activity
GO:0050347 IDA trans-octaprenyltranstransferase activity
GO:0050878 IMP regulation of body fluid levels
GO:0051290 IPI protein heterotetramerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369031 PDSS2-002 protein_coding Homo_sapiens 0 771
ENST00000369037 PDSS2-001 protein_coding Homo_sapiens 0 1832
ENST00000449027 PDSS2-003 protein_coding Homo_sapiens 0 241

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