C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear transport factor 2, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095978 Nutf2-ps1-201 ENSMUSG00000071497 10090 - 19:53588204-53589067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095978 3.234±0.42 0.305±0.21 0.344±0.25 11.327±10.23 1.329±0.40 0.710±0.30 1.599±0.30 0.781±0.39 6.550±13.06 0.971±0.20 0.314±0.12 3.795±2.42 0.236±0.11 0.592±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q9 CIL_0008Q9_0002 VISTA 19:53415569-54017446

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219169 NUTF2-001 protein_coding Homo_sapiens 0 1083
ENST00000448540 NUTF2P3-001 processed_pseudogene Homo_sapiens 0 433
ENST00000453086 NUTF2P7-001 processed_pseudogene Homo_sapiens 0 497
ENST00000458353 NUTF2P4-001 processed_pseudogene Homo_sapiens 0 479
ENST00000551207 NUTF2P2-001 processed_pseudogene Homo_sapiens 0 532
ENST00000560892 NUTF2P6-001 processed_pseudogene Homo_sapiens 0 416
ENST00000567105 NUTF2-002 protein_coding Homo_sapiens 0 503
ENST00000568233 NUTF2-007 retained_intron Homo_sapiens 0 497
ENST00000568390 NUTF2-006 retained_intron Homo_sapiens 0 346
ENST00000568396 NUTF2-004 protein_coding Homo_sapiens 0 1014
ENST00000569436 NUTF2-003 protein_coding Homo_sapiens 0 1014
ENST00000570026 NUTF2-005 retained_intron Homo_sapiens 0 278
ENST00000587481 NUTF2-012 retained_intron Homo_sapiens 0 593
ENST00000587647 CTD-2587H24.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000604593 NUTF2P8-001 processed_pseudogene Homo_sapiens 0 313

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