C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: upregulated during skeletal muscle growth 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096014 Usmg5-201 ENSMUSG00000071528 10090 - 19:47083471-47090625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096014 61.070±12.57 7.824±1.17 237.418±42.11 213.606±79.09 36.573±21.48 35.280±5.33 346.373±28.67 201.877±77.69 259.947±183.61 28.283±5.43 600.879±40.47 182.891±127.18 319.926±82.86 38.150±6.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065U CIL_00065U_0002 CGP 19:47033619-47083479
CIL_0001HK CIL_0001HK_0003 CGP 19:47067748-47090625
CIL_00039E CIL_00039E_0003 CGP 19:47083471-47131143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309579 USMG5-002 protein_coding Homo_sapiens 0 344
ENST00000337003 USMG5-003 protein_coding Homo_sapiens 0 335
ENST00000369811 USMG5-005 protein_coding Homo_sapiens 0 335
ENST00000369815 USMG5-001 protein_coding Homo_sapiens 0 335
ENST00000369825 USMG5-004 protein_coding Homo_sapiens 0 335
ENST00000425964 USMG5P1-001 processed_pseudogene Homo_sapiens 0 228

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