C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097080 Als2cr11-001 ENSMUSG00000072295 10090 - 1:59050506-59094900 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097080
Transcript ID Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097080 0.022±0.01 0.050±0.02 0.006±0.00 0.042±0.00 0.017±0.00 0.026±0.00 0.019±0.01 65.904±69.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_00020Q CIL_00020Q_0002 CGP 1:58973522-59094900
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_00020P CIL_00020P_0002 CGP 1:59050506-59120408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286195 ALS2CR11-001 protein_coding Homo_sapiens 0 438
ENST00000439140 ALS2CR11-003 protein_coding Homo_sapiens 0 438
ENST00000439802 ALS2CR11-002 protein_coding Homo_sapiens 0 438
ENST00000450242 ALS2CR11-005 protein_coding Homo_sapiens 0 438

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