C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin beta 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097609 Pcdhb22-201 ENSMUSG00000073591 10090 + 18:37518353-37521419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097609 2.298±0.67 6.693±0.70 0.857±0.09 1.710±0.08 2.200±0.66 1.013±0.19 0.756±0.08 0.662±0.15 0.151±0.05 2.126±0.30 0.230±0.05 3.196±1.29 0.113±0.06 0.113±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062S CIL_00062S_000I CGP 18:37513652-37521419

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000231134 PCDHB5-001 protein_coding Homo_sapiens 0 976
ENST00000231173 PCDHB15-001 protein_coding Homo_sapiens 0 1498
ENST00000618012 PCDHGB9P-001 unprocessed_pseudogene Homo_sapiens 0.000000000002 79
ENST00000623671 PCDHB15-002 protein_coding Homo_sapiens 0 292

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