C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097920 Agbl4-009 ENSMUSG00000061298 10090 + 4:110397791-111657510 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungOvaryPlacentaTestisENSMUST00000097920
Transcript ID Adrenal Brain Breast Kidney Lung Ovary Placenta Testis
ENSMUST00000097920 0.082±0.01 0.441±0.01 0.020±0.00 0.061±0.01 0.087±0.05 0.224±0.13 0.029±0.00 28.986±13.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000632 CIL_000632_0003 CGP 4:110397661-111664324

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004181 IDA metallocarboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0015631 IDA tubulin binding
GO:0035609 IDA C-terminal protein deglutamylation
GO:0035610 IDA protein side chain deglutamylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334103 AGBL4-201 protein_coding Homo_sapiens 0 859
ENST00000371836 AGBL4-003 protein_coding Homo_sapiens 0 941
ENST00000371838 AGBL4-004 protein_coding Homo_sapiens 0 1314
ENST00000371839 AGBL4-001 protein_coding Homo_sapiens 0 1796
ENST00000416121 AGBL4-002 protein_coding Homo_sapiens 0 989
ENST00000497451 AGBL4-005 processed_transcript Homo_sapiens 0 366

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