C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371839 AGBL4-001 ENSG00000186094 9606 - 1:48532855-50023913 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000371839
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000371839 0.037±0.00 0.436±0.00 1.908±0.90 0.195±0.00 0.046±0.00 0.333±0.00 0.046±0.00 0.216±0.00 0.059±0.06 0.223±0.06 0.433±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000633 CIL_000633_0002 CGP 1:48295372-50023913
CIL_0008UZ CIL_0008UZ_0001 VISTA 1:48347085-48947691
CIL_000632 CIL_000632_0002 CGP 1:48532855-50023913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004181 ISS:IEA metallocarboxypeptidase activity
GO:0005515 IEA protein binding
GO:0005829 ISS cytosol
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding
GO:0015631 ISS tubulin binding
GO:0035609 ISS C-terminal protein deglutamylation
GO:0035610 ISS protein side chain deglutamylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106592 Agbl4-001 protein_coding Mus_musculus 0 1820
ENSMUST00000080744 Agbl4-010 protein_coding Mus_musculus 0 1796
ENSMUST00000097920 Agbl4-009 protein_coding Mus_musculus 0 1796
ENSMUST00000106591 Agbl4-003 protein_coding Mus_musculus 0 1336
ENSMUST00000148038 Agbl4-002 protein_coding Mus_musculus 0 989
ENSDART00000132908 agbl4-001 protein_coding Danio_rerio 0 697
ENSMUST00000154123 Agbl4-007 processed_transcript Mus_musculus 0 512
ENSMUST00000106587 Agbl4-004 protein_coding Mus_musculus 0 501
ENSMUST00000142460 Agbl4-008 processed_transcript Mus_musculus 0 492
ENSMUST00000106589 Agbl4-005 protein_coding Mus_musculus 0 244

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