C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: partner and localizer of BRCA2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098068 Palb2-001 ENSMUSG00000044702 10090 - 7:122107262-122132946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000098068
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000098068 0.430±0.10 0.194±0.01 1.034±0.03 0.113±0.00 0.624±0.12 0.040±0.01 0.160±0.09 1.765±1.21 0.067±0.02 0.352±0.20 1.071±0.61 0.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VC CIL_0003VC_0003 CGP 7:122085403-122132946
CIL_0006D1 CIL_0006D1_0002 CGP 7:122107262-122149044

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 ISS double-strand break repair via homologous recombination
GO:0001756 IMP somitogenesis
GO:0001833 IMP inner cell mass cell proliferation
GO:0003677 ISS DNA binding
GO:0005634 IEA nucleus
GO:0007498 IMP mesoderm development
GO:0009887 IMP organ morphogenesis
GO:0036342 IMP post-anal tail morphogenesis
GO:0043066 IMP negative regulation of apoptotic process

Homologs

No Homologs available.

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