C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: par-6 family cell polarity regulator alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098444 Pard6a-202 ENSMUSG00000005699 10090 + 8:105701154-105703493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098444
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098444 5.438±0.80 1.494±0.38 1.897±0.15 3.028±1.26 1.843±0.44 2.088±0.83 1.240±0.21 3.138±0.94 3.017±1.32 2.314±0.81 1.274±0.59 4.082±1.91 1.329±0.61 11.712±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079G CIL_00079G_0002 CGP 8:105698159-105703493
CIL_00078Z CIL_00078Z_0002 CGP 8:105701154-105707933

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005080 IPI protein kinase C binding
GO:0005737 IDA cytoplasm
GO:0005938 IDA cell cortex
GO:0043234 IDA protein complex
GO:0045177 IDA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219255 PARD6A-001 protein_coding Homo_sapiens 0 1325
ENST00000353265 PARD6G-001 protein_coding Homo_sapiens 0 281
ENST00000458121 PARD6A-002 protein_coding Homo_sapiens 0 1306
ENST00000602551 PARD6A-004 protein_coding Homo_sapiens 0 1064
ENST00000602727 PARD6A-003 retained_intron Homo_sapiens 0 1271

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