C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-maf musculoaponeurotic fibrosarcoma oncogene family, protein B (avian)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099126 Mafb-001 ENSMUSG00000074622 10090 - 2:160363703-160367065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099126 3.984±0.47 4.795±0.61 4.308±0.58 3.736±1.54 11.527±6.07 6.084±1.37 1.567±0.40 4.008±0.23 3.152±0.93 2.460±0.17 6.031±2.96 5.577±0.88 1.223±1.09 1.454±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U5 CIL_0007U5_0002 VISTA 2:159944493-160545157
CIL_0007LF CIL_0007LF_0002 UCNEbase 2:159986827-160493553
CIL_0007RT CIL_0007RT_0002 VISTA 2:159999417-160601134
CIL_0007XC CIL_0007XC_0002 VISTA 2:160082008-160682874
CIL_0008NB CIL_0008NB_0002 VISTA 2:160095708-160696677
CIL_0009AS CIL_0009AS_0002 VISTA 2:160115715-160717232
CIL_0009AT CIL_0009AT_0002 VISTA 2:160121995-160725459
CIL_0008TO CIL_0008TO_0002 VISTA 2:160151305-160752587
CIL_0009AU CIL_0009AU_0002 VISTA 2:160192291-160794448
CIL_0007XA CIL_0007XA_0002 VISTA 2:160203620-160804635
CIL_0008MI CIL_0008MI_0002 VISTA 2:160213670-160814864
CIL_0008QO CIL_0008QO_0002 VISTA 2:160215694-160817266
CIL_0009AV CIL_0009AV_0002 VISTA 2:160278530-160880585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0007379 IMP segment specification
GO:0007585 IMP respiratory gaseous exchange
GO:0008134 IEA transcription factor binding
GO:0021571 IMP rhombomere 5 development
GO:0021572 IMP rhombomere 6 development
GO:0033077 IMP T cell differentiation in thymus
GO:0035284 IMP brain segmentation
GO:0042472 IMP inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0045647 IEA negative regulation of erythrocyte differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IMP thymus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002309 mafba-201 protein_coding Danio_rerio 0 361
ENST00000333480 MAFA-001 protein_coding Homo_sapiens 9e-22 110
ENST00000373313 MAFB-001 protein_coding Homo_sapiens 0 2525

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