C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373313 MAFB-001 ENSG00000204103 9606 - 20:40685848-40689240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373313 16.295±0.00 16.152±0.00 1.226±0.00 3.986±3.09 9.115±4.73 1.580±0.55 3.541±2.89 9.451±4.82 3.998±1.73 5.352±2.11 2.073±1.08 4.896±2.09 11.804±1.16 3.720±1.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RV CIL_0006RV_0002 CGP 20:38962299-40689240
CIL_0007LF CIL_0007LF_0001 UCNEbase 20:40234585-40834081
CIL_0007U5 CIL_0007U5_0001 VISTA 20:40240230-40840904
CIL_0007RT CIL_0007RT_0001 VISTA 20:40307139-40908986
CIL_0007XC CIL_0007XC_0001 VISTA 20:40405542-41006419
CIL_0008NB CIL_0008NB_0001 VISTA 20:40418624-41019573
CIL_0009AS CIL_0009AS_0001 VISTA 20:40438600-41039972
CIL_0009AT CIL_0009AT_0001 VISTA 20:40443816-41046384
CIL_0008TO CIL_0008TO_0001 VISTA 20:40476967-41078466
CIL_0009AU CIL_0009AU_0001 VISTA 20:40532909-41134985
CIL_0007XA CIL_0007XA_0001 VISTA 20:40544008-41145062
CIL_0008MI CIL_0008MI_0001 VISTA 20:40554707-41155953
CIL_0008QO CIL_0008QO_0001 VISTA 20:40556740-41158918
CIL_0009AV CIL_0009AV_0001 VISTA 20:40645674-41248255

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007379 IEA segment specification
GO:0007423 TAS sensory organ development
GO:0007585 IEA respiratory gaseous exchange
GO:0008134 IDA transcription factor binding
GO:0021571 IEA rhombomere 5 development
GO:0021572 IEA rhombomere 6 development
GO:0033077 IEA T cell differentiation in thymus
GO:0035284 IEA brain segmentation
GO:0042472 IEA inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0045647 IDA negative regulation of erythrocyte differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048538 IEA thymus development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099126 Mafb-001 protein_coding Mus_musculus 0 2525
ENSDART00000002309 mafba-201 protein_coding Danio_rerio 0 388
ENSMUST00000062002 Mafa-201 protein_coding Mus_musculus 4e-22 111

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