C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beaded filament structural protein 1, filensin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377873 BFSP1-001 ENSG00000125864 9606 - 20:17493905-17531369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000377873
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000377873 0.208±0.00 1.049±0.00 1.039±0.25 0.557±0.43 0.236±0.17 0.132±0.10 0.805±0.00 0.310±0.14 0.209±0.11 1.713±0.94 1.725±0.39 3.596±2.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A3 CIL_0007A3_0002 CGP 20:17226107-17569220
CIL_0002DJ CIL_0002DJ_0001 CGP 20:17493905-17609919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005212 IEA structural constituent of eye lens
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005882 IEA intermediate filament
GO:0005886 IDA plasma membrane
GO:0008150 ND biological_process
GO:0015629 IDA actin cytoskeleton
GO:0048469 IEA cell maturation
GO:0070307 IEA lens fiber cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028907 Bfsp1-001 protein_coding Mus_musculus 0 1158
ENSMUST00000099296 Bfsp1-002 protein_coding Mus_musculus 0 1092

Loading