C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dual oxidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099461 Duox1-001 ENSMUSG00000033268 10090 + 2:122315672-122347972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099461 0.164±0.04 0.067±0.04 2.852±0.10 0.062±0.02 1.020±0.19 0.106±0.05 0.153±0.05 0.073±0.04 0.003±0.00 0.770±0.28 0.102±0.03 0.113±0.06 0.068±0.02 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QK CIL_0004QK_0003 CGP 2:122302191-122347972
CIL_0004DG CIL_0004DG_0002 CGP 2:122315672-122369162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004601 IEA peroxidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006590 IEA thyroid hormone generation
GO:0006979 IEA response to oxidative stress
GO:0016021 IEA integral component of membrane
GO:0016174 IEA NAD(P)H oxidase activity
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0020037 IEA heme binding
GO:0042335 IEA cuticle development
GO:0050665 IEA hydrogen peroxide biosynthetic process
GO:0055114 IEA oxidation-reduction process
GO:0072593 IGI reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321429 DUOX1-006 protein_coding Homo_sapiens 0 5389
ENST00000389037 DUOX1-001 protein_coding Homo_sapiens 0 5389
ENST00000389039 DUOX2-001 protein_coding Homo_sapiens 0 1500
ENST00000557893 DUOX1-004 retained_intron Homo_sapiens 0 981
ENST00000558383 DUOX2-002 retained_intron Homo_sapiens 0 712
ENST00000558446 DUOX1-009 retained_intron Homo_sapiens 0 222
ENST00000558744 DUOX1-011 retained_intron Homo_sapiens 7e-24 113
ENST00000558991 DUOX1-002 retained_intron Homo_sapiens 0 257
ENST00000559219 DUOX1-008 retained_intron Homo_sapiens 0 547
ENST00000559221 DUOX1-012 processed_transcript Homo_sapiens 0 224
ENST00000559716 DUOX1-010 retained_intron Homo_sapiens 0 1046
ENST00000561166 DUOX1-005 protein_coding Homo_sapiens 0 4194
ENST00000561220 DUOX1-003 nonsense_mediated_decay Homo_sapiens 0 3707
ENST00000603300 DUOX2-201 protein_coding Homo_sapiens 0 1500

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