C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004DG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137857-ENSG00000138606 CGP 9606 15:45129933-45201175
GeneTranscriptPositionBiotype
ENSG00000137857 (DUOX1)
dual oxidase 1
ENST00000321429 (DUOX1-006) 45129933-45165576 protein_coding
ENST00000389037 (DUOX1-001) 45129994-45165574 protein_coding
ENST00000557893 (DUOX1-004) 45147955-45153239 retained_intron
ENST00000558322 (DUOX1-007) 45130018-45133934 protein_coding
ENST00000558446 (DUOX1-009) 45150300-45151881 retained_intron
ENST00000558744 (DUOX1-011) 45153788-45155851 retained_intron
ENST00000558991 (DUOX1-002) 45138646-45141039 retained_intron
ENST00000559219 (DUOX1-008) 45147546-45148558 retained_intron
ENST00000559221 (DUOX1-012) 45152500-45155535 processed_transcript
ENST00000559716 (DUOX1-010) 45151829-45160990 retained_intron
ENST00000561166 (DUOX1-005) 45138818-45165573 protein_coding
ENST00000561220 (DUOX1-003) 45130038-45164966 nonsense_mediated_decay
ENSG00000138606 (SHF)
Src homology 2 domain containing F
ENST00000290894 (SHF-001) 45167214-45201175 protein_coding
ENST00000458022 (SHF-008) 45167713-45181207 protein_coding
ENST00000558294 (SHF-012) 45167834-45175326 protein_coding
ENST00000558685 (SHF-011) 45171846-45175269 protein_coding
ENST00000559566 (SHF-009) 45171594-45178260 protein_coding
ENST00000560471 (SHF-006) 45170666-45187955 protein_coding
ENST00000560540 (SHF-002) 45167214-45187956 protein_coding
ENST00000560734 (SHF-004) 45167251-45187952 protein_coding
ENST00000561091 (SHF-014) 45174223-45187459 processed_transcript
ENST00000561239 (SHF-013) 45170208-45173658 protein_coding
ENST00000561278 (SHF-010) 45175380-45201116 protein_coding
ENSG00000259519 (RP11-519G16.2)
ENST00000560034 (RP11-519G16.2-001) 45170344-45199958 antisense
ENSG00000260035 (CTD-2651B20.6)
ENST00000563103 (CTD-2651B20.6-001) 45200325-45200632 sense_intronic
CIL_0004DG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033268-ENSMUSG00000033256 CGP 10090 2:122315672-122369162
GeneTranscriptPositionBiotype
ENSMUSG00000033256 (Shf)
Src homology 2 domain containing F
ENSMUST00000048635 (Shf-001) 122348892-122366828 protein_coding
ENSMUST00000110530 (Shf-007) 122349199-122358266 protein_coding
ENSMUST00000110531 (Shf-201) 122348893-122368918 protein_coding
ENSMUST00000110532 (Shf-004) 122349128-122368832 protein_coding
ENSMUST00000121237 (Shf-008) 122349199-122358240 protein_coding
ENSMUST00000125826 (Shf-003) 122349128-122369162 protein_coding
ENSMUST00000135848 (Shf-006) 122349504-122354131 retained_intron
ENSMUST00000139819 (Shf-005) 122349128-122359586 protein_coding
ENSMUST00000143484 (Shf-009) 122349388-122357220 protein_coding
ENSMUST00000151130 (Shf-002) 122349128-122369137 protein_coding
ENSMUSG00000033268 (Duox1)
dual oxidase 1
ENSMUST00000099461 (Duox1-001) 122315672-122347972 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DG_0001ENSG00000137857ENST00000321429ENST00000389037ENST00000557893ENST00000558322ENST00000558446ENST00000558744ENST00000558991ENST00000559219ENST00000559221ENST00000559716ENST00000561166ENST00000561220ENSG00000138606ENST00000290894ENST00000458022ENST00000558294ENST00000558685ENST00000559566ENST00000560471ENST00000560540ENST00000560734ENST00000561091ENST00000561239ENST00000561278ENSG00000259519ENST00000560034ENSG00000260035ENST00000563103CIL_0004DG_0002ENSMUSG00000033256ENSMUST00000048635ENSMUST00000110530ENSMUST00000110531ENSMUST00000110532ENSMUST00000121237ENSMUST00000125826ENSMUST00000135848ENSMUST00000139819ENSMUST00000143484ENSMUST00000151130ENSMUSG00000033268ENSMUST00000099461
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004DG_0001ENSG00000137857ENST00000321429ENST00000389037ENST00000557893ENST00000558991ENST00000559221ENST00000559716ENST00000561166ENSG00000138606ENST00000290894ENST00000458022ENST00000560471ENST00000560540ENST00000560734ENSG00000259519ENST00000560034ENSG00000260035ENST00000563103CIL_0004DG_0002ENSMUSG00000033256ENSMUST00000048635ENSMUST00000110530ENSMUST00000110531ENSMUST00000110532ENSMUST00000121237ENSMUST00000125826ENSMUST00000135848ENSMUST00000139819ENSMUST00000143484ENSMUST00000151130ENSMUSG00000033268ENSMUST00000099461
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137857 ENST00000321429 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.351±0.00 N/A N/A N/A N/A
ENST00000389037 N/A N/A N/A 1.456±0.00 0.575±0.00 N/A 0.374±0.00 N/A 1.128±0.00 6.056±1.13 N/A 3.881±0.80 0.747±0.20 3.715±0.00
ENST00000557893 N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A N/A
ENST00000559219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.011±0.00 N/A N/A N/A
ENST00000559716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.919±0.00 N/A N/A N/A
ENST00000561166 N/A 1.120±0.00 N/A N/A N/A N/A N/A 0.640±0.00 N/A N/A N/A 2.784±0.39 N/A N/A
ENST00000561220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138606 ENST00000290894 N/A N/A N/A N/A N/A N/A 1.049±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458022 N/A N/A 0.494±0.00 N/A N/A N/A N/A N/A 3.454±0.00 N/A N/A N/A N/A N/A
ENST00000558294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560471 N/A N/A N/A 2.533±1.23 0.622±0.00 N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560540 2.609±0.00 2.754±0.00 N/A N/A 2.162±0.00 7.477±0.00 N/A N/A 6.015±0.00 N/A N/A 13.082±1.95 N/A 9.168±0.00
ENST00000560734 1.998±0.00 N/A N/A N/A N/A N/A 1.569±0.00 1.833±0.00 4.450±0.00 N/A 0.867±0.00 9.003±0.00 N/A N/A
ENST00000561091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561239 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259519 ENST00000560034 5.275±0.00 7.256±0.00 N/A N/A 3.733±0.00 N/A N/A N/A N/A N/A 1.859±0.00 N/A N/A N/A
ENSG00000260035 ENST00000563103 N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A 0.131±0.00 N/A N/A 1.093±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033256 ENSMUST00000048635 0.825±0.24 0.823±0.00 N/A N/A 1.569±0.96 3.361±1.50 0.104±0.00 1.573±0.36 1.554±0.24 0.573±0.08 N/A 2.374±1.10 0.706±0.00 N/A
ENSMUST00000110530 2.068±0.27 N/A N/A N/A 1.814±0.69 N/A 0.244±0.00 1.719±0.69 2.114±0.89 0.627±0.00 N/A 3.499±0.80 3.124±0.00 N/A
ENSMUST00000110531 0.742±0.13 0.966±0.31 1.500±0.12 4.917±1.22 0.569±0.00 1.333±0.18 0.309±0.09 1.081±0.38 1.709±0.47 0.353±0.04 0.320±0.13 1.098±0.00 2.428±0.61 2.533±0.60
ENSMUST00000110532 N/A N/A N/A 12.123±0.00 N/A N/A N/A N/A N/A N/A 0.516±0.41 6.856±5.17 4.620±1.05 2.365±0.00
ENSMUST00000121237 N/A 1.273±0.00 0.995±0.07 N/A 2.363±0.91 3.101±0.24 0.497±0.02 2.227±0.77 1.496±0.49 0.646±0.09 0.285±0.11 2.867±1.06 1.258±0.23 3.067±0.75
ENSMUST00000125826 0.546±0.00 0.905±0.00 0.577±0.00 N/A 0.988±0.38 1.586±0.61 N/A 0.563±0.09 0.475±0.06 0.382±0.00 N/A 1.130±0.14 2.463±1.97 1.072±0.36
ENSMUST00000135848 N/A 3.184±0.69 N/A N/A N/A N/A N/A N/A N/A 1.645±0.00 N/A 6.268±1.93 N/A N/A
ENSMUST00000139819 N/A N/A N/A 12.341±5.19 N/A N/A 0.517±0.16 N/A N/A 0.477±0.00 0.417±0.12 N/A N/A 1.242±0.39
ENSMUST00000143484 N/A N/A N/A N/A 0.888±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151130 0.586±0.01 0.714±0.30 0.768±0.00 N/A 1.631±0.28 1.647±0.70 0.165±0.03 1.373±0.00 0.870±0.29 0.300±0.08 0.205±0.07 1.796±0.19 1.083±0.59 N/A
ENSMUSG00000033268 ENSMUST00000099461 0.164±0.04 0.067±0.04 2.852±0.10 0.062±0.02 1.020±0.19 0.106±0.05 0.153±0.05 0.073±0.04 0.003±0.00 0.770±0.28 0.102±0.03 0.113±0.06 0.068±0.02 0.037±0.00

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