C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-methyltetrahydrofolate-homocysteine methyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099856 Mtr-201 ENSMUSG00000021311 10090 - 13:12186542-12258113 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099856
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099856 2.090±1.30 1.227±0.31 2.436±1.13 0.626±0.34 1.704±0.29 1.201±0.53 1.927±0.26 1.001±0.00 2.946±1.99 2.711±0.93 2.299±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J8 CIL_0008J8_0002 VISTA 13:11813964-12415326
CIL_0008J9 CIL_0008J9_0002 VISTA 13:11824772-12428580
CIL_0008IY CIL_0008IY_0002 VISTA 13:11831518-12433920
CIL_00097Y CIL_00097Y_0002 VISTA 13:12065828-12670427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0008705 IMP methionine synthase activity
GO:0008898 IEA S-adenosylmethionine-homocysteine S-methyltransferase activity
GO:0009086 IMP methionine biosynthetic process
GO:0031419 IEA cobalamin binding
GO:0032259 IEA methylation
GO:0042558 IEA pteridine-containing compound metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000057161 MTR-201 protein_coding Danio_rerio 0 1092
ENST00000366576 MTR-002 protein_coding Homo_sapiens 0 2765
ENST00000366577 MTR-001 protein_coding Homo_sapiens 0 4556
ENST00000463959 MTR-004 processed_transcript Homo_sapiens 0 1875
ENST00000470570 MTR-003 processed_transcript Homo_sapiens 0 438
ENST00000535889 MTR-201 protein_coding Homo_sapiens 0 2429

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