C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-methyltetrahydrofolate-homocysteine methyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366577 MTR-001 ENSG00000116984 9606 + 1:236795310-236903981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366577 3.420±0.00 1.700±0.00 1.178±0.00 0.863±0.14 2.243±0.50 0.830±0.00 2.553±0.50 1.831±1.64 1.706±0.99 1.138±0.00 1.897±0.93 2.243±1.94 1.752±0.20 2.090±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097Y CIL_00097Y_0001 VISTA 1:236338883-236940914
CIL_0008IY CIL_0008IY_0001 VISTA 1:236697312-237300217
CIL_0008J9 CIL_0008J9_0001 VISTA 1:236711218-237313545
CIL_0008J8 CIL_0008J8_0001 VISTA 1:236729167-237332656

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000096 TAS sulfur amino acid metabolic process
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0007399 TAS nervous system development
GO:0008270 IEA zinc ion binding
GO:0008705 IEA methionine synthase activity
GO:0008898 IEA S-adenosylmethionine-homocysteine S-methyltransferase activity
GO:0009086 IEA methionine biosynthetic process
GO:0009235 TAS cobalamin metabolic process
GO:0031419 IEA cobalamin binding
GO:0032259 TAS methylation
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042558 IEA pteridine-containing compound metabolic process
GO:0044237 IEA cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099856 Mtr-201 protein_coding Mus_musculus 0 4556

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