C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 89, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099955 Fam89b-001 ENSMUSG00000024939 10090 - 19:5728087-5729651 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099955 62.058±4.72 113.621±15.47 28.997±4.89 68.040±46.49 95.676±39.33 41.676±3.09 23.661±4.39 29.593±5.27 24.174±11.35 86.040±12.95 11.552±2.65 94.992±28.54 9.783±4.27 81.143±5.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001222 IDA transcription corepressor binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0060392 IDA negative regulation of SMAD protein import into nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000449319 FAM89B-002 protein_coding Homo_sapiens 0 704
ENST00000526433 SSSCA1-007 protein_coding Homo_sapiens 0 422
ENST00000530349 FAM89B-004 protein_coding Homo_sapiens 0 750

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