C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 50
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100026 Ccdc50-001 ENSMUSG00000038127 10090 + 16:27388869-27452218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100026
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100026 12.720±5.17 12.919±6.75 14.829±1.29 13.743±7.17 11.783±6.13 7.086±1.36 2.468±1.39 8.017±3.11 6.027±2.67 8.154±5.33 3.960±1.08 15.078±6.40 9.674±4.87 2.388±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DS CIL_0000DS_0002 CGP 16:27353322-27452218

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392455 CCDC50-001 protein_coding Homo_sapiens 0 887
ENST00000392456 CCDC50-002 protein_coding Homo_sapiens 0 490

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