C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like endophilin B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100215 Sh3glb2-002 ENSMUSG00000026860 10090 - 2:30344809-30359240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartLiverMusclePlacentaTestisENSMUST00000100215
Transcript ID Adrenal Brain Breast Heart Liver Muscle Placenta Testis
ENSMUST00000100215 13.085±1.99 19.483±0.84 19.666±1.59 8.354±1.87 4.717±0.00 3.302±1.06 11.326±0.00 1.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OJ CIL_0006OJ_0002 CGP 2:30286397-30359337
CIL_0006OZ CIL_0006OZ_0002 CGP 2:30344809-30385521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372554 SH3GLB2-008 protein_coding Homo_sapiens 0 1557
ENST00000372559 SH3GLB2-002 protein_coding Homo_sapiens 0 1519
ENST00000372564 SH3GLB2-001 protein_coding Homo_sapiens 0 1522
ENST00000416230 SH3GLB2-006 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000416629 SH3GLB2-012 protein_coding Homo_sapiens 0 741
ENST00000417224 SH3GLB2-011 protein_coding Homo_sapiens 0 1613
ENST00000425236 SH3GLB2-007 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000455407 SH3GLB2-005 nonsense_mediated_decay Homo_sapiens 0 743
ENST00000461811 SH3GLB2-004 retained_intron Homo_sapiens 0 645
ENST00000477165 SH3GLB2-009 retained_intron Homo_sapiens 3.00004e-41 172
ENST00000479237 SH3GLB2-003 retained_intron Homo_sapiens 0 763
ENST00000483980 SH3GLB2-010 retained_intron Homo_sapiens 0 1138

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