C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100729 Psmd9-001 ENSMUSG00000029440 10090 + 5:123228190-123250131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100729
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100729 6.108±1.32 5.313±1.19 4.778±0.29 7.112±1.15 4.855±0.93 5.330±0.94 4.656±0.30 10.638±0.27 9.679±3.93 6.701±0.33 5.914±1.10 8.872±2.82 8.883±4.25 9.918±2.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZH CIL_0002ZH_0002 CGP 5:123171807-123250131
CIL_0002ZG CIL_0002ZG_0002 CGP 5:123228190-123327484

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003713 ISS transcription coactivator activity
GO:0005634 ISS nucleus
GO:0032024 ISS positive regulation of insulin secretion
GO:0043425 ISS bHLH transcription factor binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046676 ISS negative regulation of insulin secretion
GO:0070682 ISS proteasome regulatory particle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261817 PSMD9-001 protein_coding Homo_sapiens 0 664
ENST00000361485 PSMD9-010 retained_intron Homo_sapiens 2e-37 161
ENST00000535293 PSMD9-009 nonsense_mediated_decay Homo_sapiens 0 315
ENST00000537407 PSMD9-002 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000538613 PSMD9-005 protein_coding Homo_sapiens 0 403
ENST00000540962 PSMD9-006 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000541212 PSMD9-003 protein_coding Homo_sapiens 0 684
ENST00000542602 PSMD9-011 protein_coding Homo_sapiens 0 281
ENST00000543699 PSMD9-004 nonsense_mediated_decay Homo_sapiens 0 403
ENST00000544254 PSMD9-007 retained_intron Homo_sapiens 0 283
ENST00000544724 PSMD9-008 retained_intron Homo_sapiens 0 479

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