C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate-binding protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100961 Gbp9-202 ENSMUSG00000029298 10090 - 5:105079298-105139539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENSMUST00000100961
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENSMUST00000100961 3.322±0.78 1.013±0.00 6.751±1.62 1.121±0.00 1.165±0.00 6.185±0.00 1.565±0.24 4.175±0.68 2.450±0.79 0.205±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_000B CGP 5:105014153-105139540
CIL_000033 CIL_000033_000A CGP 5:105078394-105139586

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0020005 IDA symbiont-containing vacuole membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0042832 IDA defense response to protozoan
GO:0044406 IDA adhesion of symbiont to host
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294671 GBP7-001 protein_coding Homo_sapiens 0 819
ENST00000355754 GBP4-001 protein_coding Homo_sapiens 0 907
ENST00000370456 GBP6-001 protein_coding Homo_sapiens 0 1234

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