C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atonal homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101351 Atoh1-201 ENSMUSG00000073043 10090 + 6:64729146-64731233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000101351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000101351 0.060±0.03 0.032±0.01 0.008±0.00 1.197±0.69 0.067±0.02 56.530±4.74 0.013±0.00 0.016±0.00 0.109±0.10 0.094±0.00 0.027±0.02 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BW CIL_0005BW_0003 CGP 6:63255876-64731233
CIL_0005BX CIL_0005BX_0003 CGP 6:64729146-65116050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001764 IMP neuron migration
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IMP axon guidance
GO:0007420 IMP brain development
GO:0021987 IMP cerebral cortex development
GO:0030154 IMP cell differentiation
GO:0030182 IMP neuron differentiation
GO:0031490 IDA chromatin DNA binding
GO:0042472 IMP inner ear morphogenesis
GO:0042491 IMP auditory receptor cell differentiation
GO:0042667 IMP auditory receptor cell fate specification
GO:0042668 IDA auditory receptor cell fate determination
GO:0043066 IMP negative regulation of apoptotic process
GO:0043565 IDA sequence-specific DNA binding
GO:0045609 IDA positive regulation of auditory receptor cell differentiation
GO:0045664 IDA regulation of neuron differentiation
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048839 IMP inner ear development
GO:2000982 IMP positive regulation of inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306011 ATOH1-001 protein_coding Homo_sapiens 0 1251

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