C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: atonal homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306011 ATOH1-001 ENSG00000172238 9606 + 4:93828753-93830964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyOvaryTestisENST00000306011
Transcript ID Breast Colon Kidney Ovary Testis
ENST00000306011 3.124±0.00 3.132±0.55 0.084±0.00 0.267±0.21 0.016±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BW CIL_0005BW_0002 CGP 4:92304399-93830964
CIL_0005BX CIL_0005BX_0002 CGP 4:93828753-94291292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001764 IEA neuron migration
GO:0003677 IEA DNA binding
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007411 IEA axon guidance
GO:0007417 TAS central nervous system development
GO:0007420 IEA brain development
GO:0021987 IEA cerebral cortex development
GO:0030154 IEA cell differentiation
GO:0030182 IEA neuron differentiation
GO:0031490 IEA chromatin DNA binding
GO:0042472 IEA inner ear morphogenesis
GO:0042491 IEA auditory receptor cell differentiation
GO:0042667 IEA auditory receptor cell fate specification
GO:0042668 IEA auditory receptor cell fate determination
GO:0043066 IEA negative regulation of apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0045609 IEA positive regulation of auditory receptor cell differentiation
GO:0045664 IEA regulation of neuron differentiation
GO:0045666 ISS positive regulation of neuron differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048839 IEA inner ear development
GO:2000982 IEA positive regulation of inner ear receptor cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101351 Atoh1-201 protein_coding Mus_musculus 0 1251

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