C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uridine phosphorylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101525 Upp1-002 ENSMUSG00000020407 10090 + 11:9118107-9136170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101525
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101525 2.660±0.73 2.709±0.97 0.520±0.05 0.319±0.00 2.551±0.79 17.799±3.80 1.269±0.63 3.054±1.06 0.625±0.24 6.537±1.32 0.242±0.14 2.549±1.25 39.544±27.18 0.330±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000S9 CIL_0000S9_0002 CGP 11:9048594-9136170
CIL_0000S4 CIL_0000S4_0002 CGP 11:9118103-9684259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004850 IDA uridine phosphorylase activity
GO:0005737 IEA cytoplasm
GO:0006220 IMP pyrimidine nucleotide metabolic process
GO:0009166 IEA nucleotide catabolic process
GO:0044206 IEA UMP salvage
GO:0046108 IMP uridine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331803 UPP1-001 protein_coding Homo_sapiens 0 817
ENST00000395560 UPP1-004 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000395564 UPP1-003 protein_coding Homo_sapiens 0 817
ENST00000417464 UPP1-006 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000444999 UPP1-012 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000457596 UPP1-010 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000482015 UPP1-005 processed_transcript Homo_sapiens 0 424
ENST00000495446 UPP1-008 retained_intron Homo_sapiens 0 424

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