C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | rhomboid domain containing 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000101610  |
Rhbdd3-001 |
ENSMUSG00000034175 |
10090 | + |
11:5098926-5106091  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003VR | CIL_0003VR_0002 | CGP | 11:5069689-5106093 |
| CIL_0004MN | CIL_0004MN_0002 | CGP | 11:5098926-5152257 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000165 | IDA | MAPK cascade |
| GO:0001889 | IMP | liver development |
| GO:0002673 | IMP | regulation of acute inflammatory response |
| GO:0004252 | IEA | serine-type endopeptidase activity |
| GO:0005515 | IPI | protein binding |
| GO:0006508 | IEA | proteolysis |
| GO:0009410 | IMP | response to xenobiotic stimulus |
| GO:0016021 | IEA | integral component of membrane |
| GO:0032815 | IMP | negative regulation of natural killer cell activation |
| GO:0045732 | IDA | positive regulation of protein catabolic process |
| GO:0050708 | IMP | regulation of protein secretion |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000216085
|
RHBDD3-001 | protein_coding | Homo_sapiens | 0 | 852 |
|
ENST00000331029
|
EWSR1-007 | protein_coding | Homo_sapiens | 2e-18 | 99 |
|
ENST00000332050
|
EWSR1-201 | protein_coding | Homo_sapiens | 0 | 195 |
|
ENST00000397938
|
EWSR1-001 | protein_coding | Homo_sapiens | 0 | 195 |
|
ENST00000406335
|
RHBDD3-006 | protein_coding | Homo_sapiens | 0 | 375 |
|
ENST00000406548
|
EWSR1-002 | protein_coding | Homo_sapiens | 4e-25 | 121 |
|
ENST00000414672
|
RHBDD3-005 | protein_coding | Homo_sapiens | 0 | 547 |
|
ENST00000415761
|
EWSR1-017 | protein_coding | Homo_sapiens | 5e-19 | 99 |
|
ENST00000436425
|
EWSR1-012 | protein_coding | Homo_sapiens | 2e-32 | 145 |
|
ENST00000437155
|
EWSR1-013 | protein_coding | Homo_sapiens | 4e-20 | 104 |
|
ENST00000444626
|
EWSR1-016 | protein_coding | Homo_sapiens | 0 | 195 |
|
ENST00000447973
|
EWSR1-014 | protein_coding | Homo_sapiens | 2e-32 | 145 |
|
ENST00000485037
|
EWSR1-003 | retained_intron | Homo_sapiens | 4e-25 | 121 |
|
ENST00000496342
|
RHBDD3-007 | retained_intron | Homo_sapiens | 0 | 532 |
