C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM motif-containing protein kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101642 Limk2-003 ENSMUSG00000020451 10090 - 11:3344256-3371376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000101642
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000101642 3.627±0.67 4.745±0.00 20.529±0.56 2.492±0.67 2.680±0.73 2.242±0.72 0.445±0.00 6.570±0.39 2.985±0.79 3.884±0.61 41.046±35.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IMP protein kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005801 IDA cis-Golgi network
GO:0006468 IMP protein phosphorylation
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093188 limk1a-001 protein_coding Danio_rerio 3e-28 132
ENST00000331728 LIMK2-001 protein_coding Homo_sapiens 0 2462
ENST00000333611 LIMK2-004 protein_coding Homo_sapiens 0 2737
ENST00000340552 LIMK2-003 protein_coding Homo_sapiens 0 2357
ENST00000406516 LIMK2-002 protein_coding Homo_sapiens 0 2098
ENST00000422830 GS1-590J6.2-001 processed_pseudogene Homo_sapiens 0 924
ENST00000425203 LIMK2-005 protein_coding Homo_sapiens 0 486
ENST00000462625 LIMK2-006 retained_intron Homo_sapiens 5.60519e-45 185
ENST00000465937 LIMK2-007 retained_intron Homo_sapiens 0 977
ENST00000467301 LIMK2-008 processed_transcript Homo_sapiens 0 545
ENST00000482270 LIMK2-009 retained_intron Homo_sapiens 0 510

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