C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM domain kinase 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000093188 limk1a-001 ENSDARG00000063651 7955 + 15:206750-291711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000093188
Transcript ID Brain Liver Muscle
ENSDART00000093188 2.964±2.86 0.242±0.00 0.838±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001878 IDA response to yeast
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0008270 IEA zinc ion binding
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101638 Limk2-001 protein_coding Mus_musculus 3e-28 132
ENSMUST00000101640 Limk2-002 protein_coding Mus_musculus 3e-28 132
ENSMUST00000101642 Limk2-003 protein_coding Mus_musculus 3e-28 132
ENSMUST00000110029 Limk2-004 protein_coding Mus_musculus 2e-28 132
ENSMUST00000134576 Limk2-005 processed_transcript Mus_musculus 3e-28 132
ENST00000331728 LIMK2-001 protein_coding Homo_sapiens 4e-32 145
ENST00000333611 LIMK2-004 protein_coding Homo_sapiens 4e-32 145
ENST00000340552 LIMK2-003 protein_coding Homo_sapiens 3e-32 145
ENST00000406516 LIMK2-002 protein_coding Homo_sapiens 3e-32 145
ENST00000482270 LIMK2-009 retained_intron Homo_sapiens 8e-33 145

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