C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 57
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102497 Lrrc57-002 ENSMUSG00000027286 10090 - 2:120604238-120609355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000102497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000102497 2.128±0.46 2.843±0.81 3.789±0.45 6.458±0.48 1.714±0.18 1.625±0.53 1.777±0.44 1.457±0.29 3.571±2.16 2.476±0.63 1.610±0.00 2.369±0.50 5.117±1.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PJ CIL_0005PJ_0002 CGP 2:120567671-120609520
CIL_0005PI CIL_0005PI_0002 CGP 2:120604238-120621560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323443 LRRC57-001 protein_coding Homo_sapiens 0 937
ENST00000397130 LRRC57-002 protein_coding Homo_sapiens 0 937
ENST00000562868 LRRC57-006 retained_intron Homo_sapiens 0 309
ENST00000563454 LRRC57-003 protein_coding Homo_sapiens 0 933
ENST00000569830 LRRC57-004 retained_intron Homo_sapiens 0 603
ENST00000570160 LRRC57-005 protein_coding Homo_sapiens 0 580

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