C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS/WASL interacting protein family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102679 Wipf1-003 ENSMUSG00000075284 10090 - 2:73432147-73453979 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000102679
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000102679 1.109±0.00 2.343±0.27 6.499±2.93 1.887±0.92 0.475±0.00 0.648±0.15 0.219±0.09 2.342±0.60 1.390±0.50 5.769±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JW CIL_0008JW_0002 VISTA 2:72839371-73441413
CIL_0008K1 CIL_0008K1_0002 VISTA 2:72842671-73444272
CIL_0008S8 CIL_0008S8_0002 VISTA 2:72879758-73480791
CIL_00096H CIL_00096H_0002 VISTA 2:72968418-73569496
CIL_0008GI CIL_0008GI_0002 VISTA 2:72975594-73577184
CIL_0008K2 CIL_0008K2_0002 VISTA 2:72979567-73580473
CIL_00063W CIL_00063W_0004 CGP 2:73341506-73529734
CIL_0001H9 CIL_0001H9_0002 CGP 2:73429610-73580338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005884 IDA actin filament
GO:0008154 IEA actin polymerization or depolymerization
GO:0015629 IDA actin cytoskeleton
GO:0030048 IDA actin filament-based movement
GO:0031410 IEA cytoplasmic vesicle
GO:0042995 IEA cell projection
GO:0051707 IMP response to other organism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272746 WIPF1-004 protein_coding Homo_sapiens 0 1363
ENST00000359761 WIPF1-006 protein_coding Homo_sapiens 0 1430
ENST00000392546 WIPF1-002 protein_coding Homo_sapiens 0 1581
ENST00000392547 WIPF1-001 protein_coding Homo_sapiens 0 1428
ENST00000409415 WIPF1-003 protein_coding Homo_sapiens 0 909
ENST00000409891 WIPF1-005 protein_coding Homo_sapiens 0 1369
ENST00000410117 WIPF1-016 protein_coding Homo_sapiens 0 468
ENST00000436221 WIPF1-014 protein_coding Homo_sapiens 0 313
ENST00000455428 WIPF1-017 protein_coding Homo_sapiens 0 536
ENST00000467149 WIPF1-019 processed_transcript Homo_sapiens 0 383
ENST00000480400 WIPF1-015 retained_intron Homo_sapiens 0 355
ENST00000610916 WIPF1-201 protein_coding Homo_sapiens 0 1360

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