C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WAS/WASL interacting protein family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102680 Wipf1-002 ENSMUSG00000075284 10090 - 2:73430039-73485763 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102680 1.510±0.84 1.229±0.75 0.612±0.41 5.612±2.64 1.696±0.20 0.548±0.08 0.914±0.39 0.467±0.20 4.301±0.31 0.488±0.00 1.324±0.82 3.973±2.74 0.120±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JW CIL_0008JW_0002 VISTA 2:72839371-73441413
CIL_0008K1 CIL_0008K1_0002 VISTA 2:72842671-73444272
CIL_0008S8 CIL_0008S8_0002 VISTA 2:72879758-73480791
CIL_00096H CIL_00096H_0002 VISTA 2:72968418-73569496
CIL_0008GI CIL_0008GI_0002 VISTA 2:72975594-73577184
CIL_0008K2 CIL_0008K2_0002 VISTA 2:72979567-73580473
CIL_00063W CIL_00063W_0004 CGP 2:73341506-73529734
CIL_0001H9 CIL_0001H9_0002 CGP 2:73429610-73580338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005884 IDA actin filament
GO:0008154 IEA actin polymerization or depolymerization
GO:0015629 IDA actin cytoskeleton
GO:0030048 IDA actin filament-based movement
GO:0031410 IEA cytoplasmic vesicle
GO:0042995 IEA cell projection
GO:0051707 IMP response to other organism

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272746 WIPF1-004 protein_coding Homo_sapiens 0 1362
ENST00000359761 WIPF1-006 protein_coding Homo_sapiens 0 1428
ENST00000392546 WIPF1-002 protein_coding Homo_sapiens 0 1428
ENST00000392547 WIPF1-001 protein_coding Homo_sapiens 0 1428
ENST00000409415 WIPF1-003 protein_coding Homo_sapiens 0 907
ENST00000409891 WIPF1-005 protein_coding Homo_sapiens 0 1299
ENST00000410117 WIPF1-016 protein_coding Homo_sapiens 0 398
ENST00000436221 WIPF1-014 protein_coding Homo_sapiens 0 311
ENST00000455428 WIPF1-017 protein_coding Homo_sapiens 0 536
ENST00000467149 WIPF1-019 processed_transcript Homo_sapiens 0 383
ENST00000480400 WIPF1-015 retained_intron Homo_sapiens 0 257
ENST00000610916 WIPF1-201 protein_coding Homo_sapiens 0 1290

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