C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fidgetin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000333129 FIGN-001 ENSG00000182263 9606 - 2:163602611-163736007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333129
Transcript ID Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333129 0.375±0.19 0.936±0.00 0.346±0.15 0.730±0.19 0.166±0.00 0.176±0.00 0.127±0.00 0.401±0.20 0.224±0.09 0.420±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005KS CIL_0005KS_0001 CGP 2:162371407-163736012
CIL_0007R7 CIL_0007R7_0001 VISTA 2:163024403-163625682
CIL_00089I CIL_00089I_0001 VISTA 2:163193166-163794602
CIL_0007KU CIL_0007KU_0001 UCNEbase 2:163247304-164450572
CIL_0008D4 CIL_0008D4_0001 VISTA 2:163293634-163895248
CIL_0008AC CIL_0008AC_0001 VISTA 2:163417497-164018948
CIL_00098N CIL_00098N_0001 VISTA 2:163500541-164101518
CIL_0008B1 CIL_0008B1_0001 VISTA 2:163505096-164105920
CIL_0006CN CIL_0006CN_0001 CGP 2:163593396-164621848

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division
GO:0008022 IEA protein C-terminus binding
GO:0016363 ISS nuclear matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131615 Fign-001 protein_coding Mus_musculus 0 5171
ENSMUST00000102728 Fign-002 nonsense_mediated_decay Mus_musculus 0 4578
ENSMUST00000126042 Fign-004 processed_transcript Mus_musculus 0 651
ENSMUST00000153538 Fign-003 processed_transcript Mus_musculus 0 422
ENSDART00000023105 fign-201 protein_coding Danio_rerio 0 357

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