C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNFAIP3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102731 Tnip1-003 ENSMUSG00000020400 10090 - 11:54910787-54962917 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KS CIL_0001KS_0002 CGP 11:54902453-54962917
CIL_0001KR CIL_0001KR_0002 CGP 11:54910785-55033445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0009101 IEA glycoprotein biosynthetic process
GO:0043124 IEA negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0051019 IEA mitogen-activated protein kinase binding
GO:0070373 IEA negative regulation of ERK1 and ERK2 cascade
GO:0085032 IEA modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315050 TNIP1-002 protein_coding Homo_sapiens 0 1711
ENST00000389378 TNIP1-201 protein_coding Homo_sapiens 0 1639
ENST00000518977 TNIP1-005 protein_coding Homo_sapiens 0 1585
ENST00000519339 TNIP1-009 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000520695 TNIP1-012 protein_coding Homo_sapiens 0 350
ENST00000520931 TNIP1-006 protein_coding Homo_sapiens 0 1711
ENST00000521001 TNIP1-011 protein_coding Homo_sapiens 0 350
ENST00000521591 TNIP1-004 protein_coding Homo_sapiens 0 1683
ENST00000521782 TNIP1-016 retained_intron Homo_sapiens 0 191
ENST00000522100 TNIP1-010 protein_coding Homo_sapiens 0 512
ENST00000522226 TNIP1-001 protein_coding Homo_sapiens 0 1683
ENST00000523200 TNIP1-007 protein_coding Homo_sapiens 0 1297
ENST00000523338 TNIP1-003 protein_coding Homo_sapiens 0 1585
ENST00000524280 TNIP1-008 protein_coding Homo_sapiens 0 1297
ENST00000610535 TNIP1-202 protein_coding Homo_sapiens 0 1297
ENST00000610874 TNIP1-203 protein_coding Homo_sapiens 0 1297

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