C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000211445-ENSG00000145901 CGP 9606 5:151020438-151093577
GeneTranscriptPositionBiotype
ENSG00000145901 (TNIP1)
TNFAIP3 interacting protein 1 		ENST00000315050 (TNIP1-002) 151029949-151087158 protein_coding
ENST00000389378 (TNIP1-201) 151029947-151081084 protein_coding
ENST00000517329 (TNIP1-015) 151034496-151035654 retained_intron
ENST00000517504 (TNIP1-018) 151029949-151039198 protein_coding
ENST00000518977 (TNIP1-005) 151030581-151081074 protein_coding
ENST00000519339 (TNIP1-009) 151030581-151063747 nonsense_mediated_decay
ENST00000520695 (TNIP1-012) 151060322-151081034 protein_coding
ENST00000520931 (TNIP1-006) 151029945-151081016 protein_coding
ENST00000521001 (TNIP1-011) 151060354-151093577 protein_coding
ENST00000521423 (TNIP1-014) 151032050-151049903 processed_transcript
ENST00000521591 (TNIP1-004) 151030581-151081074 protein_coding
ENST00000521782 (TNIP1-016) 151042898-151046361 retained_intron
ENST00000522100 (TNIP1-010) 151045866-151087166 protein_coding
ENST00000522226 (TNIP1-001) 151030492-151087660 protein_coding
ENST00000522574 (TNIP1-017) 151030484-151037438 retained_intron
ENST00000522926 (TNIP1-013) 151078403-151081015 processed_transcript
ENST00000523200 (TNIP1-007) 151030689-151065095 protein_coding
ENST00000523338 (TNIP1-003) 151029949-151087158 protein_coding
ENST00000524280 (TNIP1-008) 151030619-151065095 protein_coding
ENST00000610535 (TNIP1-202) 151029947-151081084 protein_coding
ENST00000610874 (TNIP1-203) 151029947-151081084 protein_coding
ENSG00000211445 (GPX3)
glutathione peroxidase 3 (plasma) 		ENST00000388825 (GPX3-001) 151020563-151028993 protein_coding
ENST00000517973 (GPX3-010) 151020606-151028166 protein_coding
ENST00000519214 (GPX3-006) 151020606-151027017 nonsense_mediated_decay
ENST00000520059 (GPX3-008) 151026966-151027985 protein_coding
ENST00000520597 (GPX3-007) 151026445-151027490 retained_intron
ENST00000521632 (GPX3-003) 151025344-151028954 protein_coding
ENST00000521650 (GPX3-004) 151020604-151027461 protein_coding
ENST00000521722 (GPX3-009) 151020592-151026870 processed_transcript
ENST00000614343 (GPX3-201) 151020589-151028987 protein_coding
ENST00000622181 (GPX3-202) 151020438-151028992 protein_coding
ENST00000625178 (GPX3-011) 151021437-151021870 TEC
CIL_0001KS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018339-ENSMUSG00000020400 CGP 10090 11:54902453-54962917
GeneTranscriptPositionBiotype
ENSMUSG00000018339 (Gpx3)
glutathione peroxidase 3 		ENSMUST00000082430 (Gpx3-001) 54902772-54910377 protein_coding
ENSMUST00000125094 (Gpx3-002) 54902453-54909576 protein_coding
ENSMUST00000149324 (Gpx3-003) 54902926-54909534 protein_coding
ENSMUSG00000020400 (Tnip1)
TNFAIP3 interacting protein 1 		ENSMUST00000018482 (Tnip1-001) 54910787-54962912 protein_coding
ENSMUST00000102730 (Tnip1-007) 54910787-54962910 protein_coding
ENSMUST00000102731 (Tnip1-003) 54910787-54962917 protein_coding
ENSMUST00000108885 (Tnip1-008) 54910789-54962909 protein_coding
ENSMUST00000108886 (Tnip1-002) 54910787-54962916 protein_coding
ENSMUST00000108889 (Tnip1-201) 54910785-54956122 protein_coding
ENSMUST00000124304 (Tnip1-006) 54910787-54956104 processed_transcript
ENSMUST00000126703 (Tnip1-004) 54926704-54956122 protein_coding
ENSMUST00000132224 (Tnip1-011) 54918611-54921075 retained_intron
ENSMUST00000132776 (Tnip1-010) 54940613-54962909 processed_transcript
ENSMUST00000151736 (Tnip1-009) 54940559-54956087 processed_transcript
ENSMUST00000155316 (Tnip1-005) 54934013-54956047 protein_coding
ENSMUSG00000082180 (Gm12230)
predicted gene 12230 		ENSMUST00000118301 (Gm12230-001) 54947435-54947888 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KS_0001ENSG00000145901ENST00000315050ENST00000389378ENST00000517504ENST00000518977ENST00000520931ENST00000521591ENST00000522100ENST00000523200ENST00000523338ENST00000524280ENST00000610535ENST00000610874ENSG00000211445ENST00000388825ENST00000520597ENST00000521632ENST00000614343ENST00000625178CIL_0001KS_0002ENSMUSG00000018339ENSMUST00000082430ENSMUST00000125094ENSMUSG00000020400ENSMUST00000018482ENSMUST00000102730ENSMUST00000108886ENSMUST00000108889ENSMUST00000124304ENSMUST00000126703ENSMUSG00000082180ENSMUST00000118301
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145901 ENST00000315050 N/A N/A N/A N/A 2.001±0.00 N/A 8.295±0.00 N/A N/A 12.697±10.73 10.046±0.00 8.412±1.91 10.701±3.79 2.418±0.00
ENST00000389378 N/A 8.431±0.00 N/A N/A 10.423±8.79 N/A 10.308±8.16 N/A 4.353±0.00 26.106±0.00 N/A 5.902±0.87 5.363±0.24 5.583±0.00
ENST00000517329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.535±0.00 28.368±0.00 12.498±0.00
ENST00000518977 N/A N/A 4.571±0.00 N/A N/A 4.857±0.00 1.716±0.00 6.327±0.00 N/A 2.067±0.00 N/A N/A N/A N/A
ENST00000519339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520931 24.028±0.00 20.924±0.00 N/A 11.479±0.00 61.467±0.00 28.674±0.00 15.325±0.00 21.607±0.00 17.489±0.00 40.622±0.00 53.434±0.00 10.354±5.43 6.556±2.01 7.959±5.20
ENST00000521001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521591 N/A N/A 2.881±0.00 2.663±0.00 4.570±0.00 N/A 2.294±0.00 6.071±0.00 5.637±0.00 2.438±0.00 4.419±0.00 6.134±2.63 6.875±0.00 4.495±0.00
ENST00000521782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.099±0.00 N/A
ENST00000522226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523200 N/A N/A 2.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523338 18.382±0.00 20.978±0.00 N/A 3.831±1.59 49.939±0.00 23.748±0.00 N/A 12.674±0.00 6.235±0.00 11.838±9.90 21.071±0.00 1.936±0.00 3.933±0.00 10.876±0.00
ENST00000524280 N/A N/A N/A N/A 5.491±0.00 6.436±0.00 1.894±0.00 N/A N/A 2.412±0.00 N/A 3.801±0.00 N/A N/A
ENST00000610535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.836±0.00 N/A N/A N/A
ENST00000610874 17.908±0.00 N/A N/A N/A 23.308±0.00 N/A N/A 12.346±0.00 9.530±0.00 N/A 19.127±0.00 N/A N/A N/A
ENSG00000211445 ENST00000388825 420.845±0.00 N/A 45.630±0.00 5.831±0.00 N/A 485.947±0.00 183.058±181.53 2485.777±2482.80 266.634±0.00 572.213±565.74 191.294±0.00 87.272±64.89 358.756±209.04 34.527±21.94
ENST00000517973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.369±0.00 N/A N/A
ENST00000521632 711.076±0.00 90.484±0.00 N/A 7.411±6.05 74.948±0.00 315.219±0.00 N/A N/A 173.015±0.00 N/A 69.516±0.00 N/A N/A 51.463±0.00
ENST00000521650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614343 2807.050±0.00 217.954±0.00 301.704±0.00 11.725±9.05 125.715±71.48 501.311±491.02 58.783±45.63 19.582±0.00 47.332±33.67 150.664±116.58 39.959±12.35 32.529±28.65 10.133±0.00 110.935±0.00
ENST00000622181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000625178 10.587±0.00 1.037±0.00 0.506±0.00 N/A 1.517±0.00 14.906±0.00 0.454±0.26 3.825±0.00 0.195±0.16 4.164±4.08 1.000±0.00 0.153±0.06 0.632±0.14 0.295±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018339 ENSMUST00000082430 91.123±28.74 128.087±21.80 38.721±14.25 3.775±1.18 417.071±82.76 51.957±3.10 125.217±28.16 11693.967±270.89 4.870±3.98 368.327±88.67 69.411±9.11 224.411±199.33 233.627±152.86 29.150±30.35
ENSMUST00000125094 N/A N/A N/A 3.601±0.00 N/A N/A N/A N/A N/A N/A N/A 260.392±0.00 167.887±33.95 5.258±0.00
ENSMUST00000149324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020400 ENSMUST00000018482 1.368±0.03 N/A N/A 1.046±0.00 1.410±0.00 N/A 1.706±0.35 1.586±0.00 0.790±0.09 N/A N/A 7.078±2.34 2.714±0.00 0.655±0.20
ENSMUST00000102730 3.996±1.68 N/A 5.165±1.75 2.612±0.00 6.490±0.00 8.846±1.93 2.943±0.97 3.753±0.40 0.976±0.40 4.601±2.40 3.596±0.83 10.066±4.17 7.583±4.60 0.658±0.00
ENSMUST00000102731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108886 3.302±1.83 6.122±2.36 1.928±0.16 1.035±0.22 6.776±2.90 10.399±3.92 3.866±1.08 4.223±0.70 0.748±0.25 3.729±0.48 2.696±0.00 14.301±6.69 7.462±5.72 0.478±0.07
ENSMUST00000108889 2.277±0.10 4.778±0.50 2.395±0.22 2.249±2.27 N/A 8.508±0.55 N/A 1.876±0.54 1.110±0.26 3.579±0.01 3.736±0.70 5.293±0.41 2.820±0.57 0.796±0.25
ENSMUST00000124304 N/A N/A N/A 11.961±0.00 N/A N/A N/A N/A N/A N/A N/A 36.654±0.00 11.231±6.11 4.138±0.00
ENSMUST00000126703 3.883±0.00 9.611±0.66 N/A 1.713±0.00 11.694±3.32 22.710±4.42 N/A N/A 1.595±0.40 7.567±0.53 N/A 11.806±1.06 N/A 1.160±0.00
ENSMUST00000132224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082180 ENSMUST00000118301 0.236±0.12 N/A 0.094±0.07 0.099±0.00 0.353±0.03 0.317±0.09 0.108±0.00 0.279±0.05 0.038±0.01 0.345±0.10 N/A 0.421±0.24 0.352±0.32 0.121±0.00

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