C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine acetyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102855 Crat-001 ENSMUSG00000026853 10090 - 2:30400471-30415771 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverOvaryPlacentaTestisENSMUST00000102855
Transcript ID Adrenal Liver Ovary Placenta Testis
ENSMUST00000102855 22.702±13.16 4.260±0.91 3.805±0.00 1.373±0.30 12.950±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AW CIL_0003AW_0002 CGP 2:30364233-30400529
CIL_0005ZA CIL_0005ZA_0002 CGP 2:30392254-30415813
CIL_0003C7 CIL_0003C7_0002 CGP 2:30400471-30447806

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004092 IEA carnitine O-acetyltransferase activity
GO:0005102 IEA receptor binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005777 IEA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0006631 IEA fatty acid metabolic process
GO:0006810 IEA transport
GO:0019254 IEA carnitine metabolic process, CoA-linked

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318080 CRAT-006 protein_coding Homo_sapiens 0 2146
ENST00000455396 CRAT-010 protein_coding Homo_sapiens 0 473
ENST00000458362 CRAT-002 nonsense_mediated_decay Homo_sapiens 0 2036
ENST00000467343 CRAT-011 processed_transcript Homo_sapiens 0 401

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