C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003C7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095321-ENSG00000119383 CGP 9606 9:129094810-129148946
GeneTranscriptPositionBiotype
ENSG00000095321 (CRAT)
carnitine O-acetyltransferase 		ENST00000318080 (CRAT-006) 129094810-129110804 protein_coding
ENST00000393384 (CRAT-004) 129107334-129110711 protein_coding
ENST00000415948 (CRAT-007) 129102442-129109276 nonsense_mediated_decay
ENST00000441796 (CRAT-005) 129104197-129110769 nonsense_mediated_decay
ENST00000455396 (CRAT-010) 129095206-129098371 protein_coding
ENST00000455830 (CRAT-012) 129107814-129110672 protein_coding
ENST00000458362 (CRAT-002) 129095397-129110782 nonsense_mediated_decay
ENST00000464290 (CRAT-003) 129101907-129111189 processed_transcript
ENST00000467343 (CRAT-011) 129095456-129098036 processed_transcript
ENSG00000119383 (PPP2R4)
protein phosphatase 2A activator, regulatory subunit 4 		ENST00000337738 (PPP2R4-201) 129111314-129148945 protein_coding
ENST00000347048 (PPP2R4-015) 129111409-129148946 protein_coding
ENST00000348141 (PPP2R4-020) 129111336-129148946 protein_coding
ENST00000355007 (PPP2R4-016) 129111414-129148946 protein_coding
ENST00000357197 (PPP2R4-202) 129111314-129148945 protein_coding
ENST00000358994 (PPP2R4-010) 129110950-129148944 protein_coding
ENST00000393370 (PPP2R4-011) 129111318-129148946 protein_coding
ENST00000411917 (PPP2R4-001) 129136497-129142982 protein_coding
ENST00000414331 (PPP2R4-009) 129111435-129134842 protein_coding
ENST00000414510 (PPP2R4-003) 129140008-129148287 protein_coding
ENST00000417504 (PPP2R4-021) 129119022-129131639 protein_coding
ENST00000417728 (PPP2R4-017) 129111688-129142552 protein_coding
ENST00000419582 (PPP2R4-005) 129141646-129147957 protein_coding
ENST00000423100 (PPP2R4-002) 129139382-129147998 protein_coding
ENST00000432124 (PPP2R4-024) 129140100-129143087 protein_coding
ENST00000432651 (PPP2R4-006) 129141954-129148006 protein_coding
ENST00000434095 (PPP2R4-007) 129142025-129147995 protein_coding
ENST00000435132 (PPP2R4-014) 129141994-129147772 protein_coding
ENST00000435305 (PPP2R4-004) 129140118-129142940 protein_coding
ENST00000436883 (PPP2R4-023) 129140008-129143654 protein_coding
ENST00000440346 (PPP2R4-019) 129119513-129129065 protein_coding
ENST00000445241 (PPP2R4-013) 129111413-129136566 protein_coding
ENST00000452489 (PPP2R4-203) 129111688-129148945 protein_coding
ENST00000453358 (PPP2R4-018) 129111868-129134827 protein_coding
ENST00000455240 (PPP2R4-022) 129136471-129138111 protein_coding
ENST00000455292 (PPP2R4-012) 129110964-129136556 protein_coding
ENSG00000221521 (AL158151.2)
 ENST00000408594 (AL158151.2-201) 129107050-129107151 miRNA
CIL_0003C7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026853-ENSMUSG00000039515 CGP 10090 2:30400471-30447806
GeneTranscriptPositionBiotype
ENSMUSG00000026853 (Crat)
carnitine acetyltransferase 		ENSMUST00000028207 (Crat-002) 30401101-30415813 protein_coding
ENSMUST00000102854 (Crat-014) 30402578-30415524 protein_coding
ENSMUST00000102855 (Crat-001) 30400471-30415771 protein_coding
ENSMUST00000128593 (Crat-006) 30414060-30415600 processed_transcript
ENSMUST00000129494 (Crat-005) 30413162-30415333 protein_coding
ENSMUST00000132981 (Crat-008) 30408070-30415308 protein_coding
ENSMUST00000134120 (Crat-012) 30413141-30415518 protein_coding
ENSMUST00000142096 (Crat-013) 30414595-30415407 protein_coding
ENSMUST00000146603 (Crat-003) 30400476-30406679 processed_transcript
ENSMUST00000146822 (Crat-009) 30413045-30414339 processed_transcript
ENSMUST00000154595 (Crat-007) 30402637-30404961 protein_coding
ENSMUST00000155790 (Crat-010) 30402498-30405288 protein_coding
ENSMUST00000156702 (Crat-004) 30408115-30415548 nonsense_mediated_decay
ENSMUSG00000026856 (Dolpp1)
dolichyl pyrophosphate phosphatase 1 		ENSMUST00000028209 (Dolpp1-001) 30392254-30400529 protein_coding
ENSMUST00000113612 (Dolpp1-003) 30392416-30400527 protein_coding
ENSMUST00000123202 (Dolpp1-002) 30392416-30400527 protein_coding
ENSMUST00000133991 (Dolpp1-008) 30392454-30397813 retained_intron
ENSMUST00000137248 (Dolpp1-004) 30392439-30400528 nonsense_mediated_decay
ENSMUST00000151018 (Dolpp1-011) 30395598-30400527 processed_transcript
ENSMUST00000152303 (Dolpp1-009) 30397421-30399988 processed_transcript
ENSMUST00000155196 (Dolpp1-010) 30392445-30399684 nonsense_mediated_decay
ENSMUST00000156059 (Dolpp1-006) 30392428-30397315 retained_intron
ENSMUST00000156704 (Dolpp1-005) 30392430-30395911 retained_intron
ENSMUST00000156984 (Dolpp1-007) 30392440-30396156 retained_intron
ENSMUSG00000039515 (Ppp2r4)
protein phosphatase 2A activator, regulatory subunit B 		ENSMUST00000042055 (Ppp2r4-001) 30416039-30447805 protein_coding
ENSMUST00000113601 (Ppp2r4-003) 30416131-30447806 protein_coding
ENSMUST00000113603 (Ppp2r4-002) 30416142-30447617 protein_coding
ENSMUST00000125561 (Ppp2r4-009) 30438229-30446950 nonsense_mediated_decay
ENSMUST00000125743 (Ppp2r4-004) 30416196-30447804 retained_intron
ENSMUST00000128516 (Ppp2r4-005) 30428354-30438101 retained_intron
ENSMUST00000130741 (Ppp2r4-010) 30445656-30447074 processed_transcript
ENSMUST00000131476 (Ppp2r4-006) 30441853-30447131 protein_coding
ENSMUST00000135105 (Ppp2r4-011) 30445716-30446776 processed_transcript
ENSMUST00000136009 (Ppp2r4-007) 30442735-30446806 protein_coding
ENSMUST00000137741 (Ppp2r4-008) 30443219-30446899 processed_transcript
ENSMUST00000152165 (Ppp2r4-013) 30416137-30432029 nonsense_mediated_decay
ENSMUST00000159932 (Ppp2r4-014) 30416302-30428402 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003C7_0001ENSG00000095321ENST00000318080ENST00000458362ENSG00000119383ENST00000337738ENST00000347048ENST00000355007ENST00000357197ENST00000358994ENST00000393370ENST00000414331ENST00000414510ENST00000423100ENST00000452489ENST00000455292ENSG00000221521ENST00000408594CIL_0003C7_0002ENSMUSG00000026853ENSMUST00000028207ENSMUST00000102854ENSMUST00000102855ENSMUST00000146603ENSMUST00000154595ENSMUSG00000026856ENSMUST00000028209ENSMUST00000113612ENSMUST00000152303ENSMUST00000155196ENSMUSG00000039515ENSMUST00000042055ENSMUST00000113601ENSMUST00000113603ENSMUST00000125743ENSMUST00000131476ENSMUST00000137741
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095321 ENST00000318080 27.978±0.00 20.235±0.00 N/A 14.020±10.81 40.816±0.00 13.694±12.32 14.948±12.81 19.179±13.90 49.489±0.00 12.270±0.00 49.274±26.77 23.973±16.37 15.509±6.32 114.087±0.00
ENST00000393384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458362 N/A N/A 2.232±0.00 3.696±0.00 1.342±0.00 3.545±0.00 2.989±0.00 10.717±0.00 3.087±0.00 0.967±0.00 7.477±0.00 5.789±0.00 11.458±0.00 80.991±0.00
ENST00000464290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119383 ENST00000337738 N/A 11.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.871±0.00 4.727±0.00 17.811±0.00
ENST00000347048 N/A N/A N/A N/A N/A N/A N/A 21.529±0.00 20.172±0.00 N/A N/A N/A 22.728±3.32 N/A
ENST00000348141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000355007 14.222±0.00 21.660±0.00 1.586±0.00 14.800±0.00 18.185±0.00 N/A N/A N/A N/A N/A N/A 3.400±0.00 N/A 46.659±0.00
ENST00000357197 N/A N/A N/A 4.099±0.00 N/A N/A N/A N/A N/A 0.954±0.00 N/A N/A N/A N/A
ENST00000358994 N/A N/A N/A N/A 1.710±0.00 N/A N/A 3.266±0.00 N/A 1.917±0.00 N/A N/A N/A N/A
ENST00000393370 10.210±0.00 N/A N/A 28.070±18.52 13.113±0.00 9.516±6.90 14.590±0.00 30.863±0.00 1.418±0.00 11.996±0.00 N/A 25.237±10.84 17.126±1.98 41.455±2.97
ENST00000411917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.492±0.00 N/A N/A
ENST00000414510 N/A N/A N/A N/A N/A N/A 5.348±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000417504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.186±0.00 N/A N/A N/A N/A
ENST00000432124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.654±0.00 N/A
ENST00000453358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455292 N/A N/A N/A N/A 1.728±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221521 ENST00000408594 N/A N/A N/A 0.525±0.00 0.259±0.00 N/A 0.692±0.00 N/A N/A 0.515±0.00 N/A N/A N/A 0.872±0.26
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026853 ENSMUST00000028207 33.437±13.82 29.770±6.29 10.326±0.00 10.203±0.22 62.481±12.45 12.313±2.06 56.249±20.54 36.057±18.60 12.401±3.69 15.628±6.00 25.181±3.20 12.932±4.14 10.364±3.82 70.363±14.20
ENSMUST00000102854 N/A N/A N/A 20.093±0.00 62.319±12.91 N/A N/A N/A 8.137±2.33 N/A N/A 14.673±3.08 5.617±1.13 116.717±0.00
ENSMUST00000102855 N/A 22.702±13.16 N/A N/A N/A N/A N/A N/A 4.260±0.91 N/A N/A 3.805±0.00 1.373±0.30 12.950±0.00
ENSMUST00000128593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146603 N/A 31.581±12.48 N/A N/A 55.118±0.88 12.083±1.81 N/A 18.493±0.00 6.335±1.05 9.471±1.91 N/A 8.018±0.70 N/A N/A
ENSMUST00000146822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154595 N/A N/A N/A N/A 250.224±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026856 ENSMUST00000028209 14.936±0.00 23.595±4.04 11.960±0.00 19.256±3.07 N/A 33.170±5.41 N/A N/A 12.376±2.77 16.841±1.75 N/A 16.127±3.15 11.546±0.96 N/A
ENSMUST00000113612 N/A N/A N/A 6.057±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.931±3.16 N/A
ENSMUST00000123202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152303 N/A N/A N/A N/A N/A 37.509±0.00 N/A N/A N/A N/A N/A 22.996±0.00 12.916±0.00 N/A
ENSMUST00000155196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.357±0.00 N/A
ENSMUST00000156059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039515 ENSMUST00000042055 76.534±22.07 57.633±8.62 34.606±2.53 34.636±5.69 50.448±10.05 29.043±2.26 22.418±2.82 42.515±4.60 37.412±26.40 37.372±0.94 13.256±1.48 33.940±8.13 21.396±10.51 16.806±12.28
ENSMUST00000113601 N/A N/A N/A N/A N/A N/A N/A 16.538±5.18 N/A N/A N/A N/A N/A N/A
ENSMUST00000113603 N/A N/A N/A 8.992±0.00 N/A 8.923±0.65 N/A N/A N/A N/A N/A 12.313±2.71 5.552±2.61 2.101±0.00
ENSMUST00000125561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125743 9.824±0.36 8.915±0.00 5.400±0.00 9.219±1.47 11.864±2.15 7.866±1.24 2.889±0.00 6.701±0.63 5.161±2.93 7.367±0.91 N/A 11.258±4.40 2.703±0.01 2.633±1.87
ENSMUST00000128516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131476 N/A 32.422±2.79 N/A N/A N/A N/A 17.387±0.05 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135105 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.888±0.00 N/A N/A
ENSMUST00000152165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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