C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine O-acetyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318080 CRAT-006 ENSG00000095321 9606 - 9:129094810-129110804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318080
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318080 27.978±0.00 20.235±0.00 14.020±10.81 40.816±0.00 13.694±12.32 14.948±12.81 19.179±13.90 49.489±0.00 12.270±0.00 49.274±26.77 23.973±16.37 15.509±6.32 114.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZA CIL_0005ZA_0001 CGP 9:129081100-129111189
CIL_0003C7 CIL_0003C7_0001 CGP 9:129094810-129148946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004092 IDA carnitine O-acetyltransferase activity
GO:0005102 IPI receptor binding
GO:0005739 IDA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005777 IDA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0005783 IEA endoplasmic reticulum
GO:0006810 IEA transport
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0019254 IDA carnitine metabolic process, CoA-linked
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028207 Crat-002 protein_coding Mus_musculus 0 2170
ENSMUST00000102855 Crat-001 protein_coding Mus_musculus 0 2146
ENSMUST00000102854 Crat-014 protein_coding Mus_musculus 0 2036
ENSMUST00000146603 Crat-003 processed_transcript Mus_musculus 0 1090
ENSMUST00000155790 Crat-010 protein_coding Mus_musculus 0 472
ENSMUST00000154595 Crat-007 protein_coding Mus_musculus 0 411

Loading