C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exportin 1, CRM1 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102869 Xpo1-001 ENSMUSG00000020290 10090 + 11:23256078-23298249 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000102869
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000102869 1.506±0.00 0.990±0.00 2.230±0.00 7.861±0.00 0.782±0.00 0.342±0.00 0.478±0.00 2.155±1.33 0.459±0.00 2.025±0.38 5.655±0.00 0.959±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000055 IEA ribosomal large subunit export from nucleus
GO:0000056 IEA ribosomal small subunit export from nucleus
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000776 ISS kinetochore
GO:0003723 IEA RNA binding
GO:0005487 IEA nucleocytoplasmic transporter activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005642 IEA annulate lamellae
GO:0005737 IEA cytoplasm
GO:0006611 IDA protein export from nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity
GO:0010824 IMP regulation of centrosome duplication
GO:0016020 IEA membrane
GO:0019904 IEA protein domain specific binding
GO:0030529 ISO ribonucleoprotein complex
GO:0031965 IEA nuclear membrane
GO:0034504 IMP protein localization to nucleus
GO:0042176 IMP regulation of protein catabolic process
GO:0042493 IEA response to drug
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046825 IMP regulation of protein export from nucleus
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000154823 xpo1b-001 protein_coding Danio_rerio 0 2026
ENST00000401558 XPO1-001 protein_coding Homo_sapiens 0 6008
ENST00000404992 XPO1-006 protein_coding Homo_sapiens 0 4920
ENST00000406957 XPO1-004 protein_coding Homo_sapiens 0 4591
ENST00000420673 XPO1-019 protein_coding Homo_sapiens 0 486
ENST00000422552 XPO1-018 protein_coding Homo_sapiens 0 464
ENST00000428210 XPO1-005 nonsense_mediated_decay Homo_sapiens 0 3609
ENST00000436018 XPO1-009 protein_coding Homo_sapiens 0 318
ENST00000437159 XPO1-024 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000443240 XPO1-008 protein_coding Homo_sapiens 0 660
ENST00000449444 XPO1-016 protein_coding Homo_sapiens 0 329
ENST00000451765 XPO1-015 protein_coding Homo_sapiens 0 822
ENST00000457483 XPO1-017 protein_coding Homo_sapiens 0 457
ENST00000461407 XPO1-007 retained_intron Homo_sapiens 0 579
ENST00000469337 XPO1-028 retained_intron Homo_sapiens 0 468
ENST00000476585 XPO1-023 processed_transcript Homo_sapiens 0 359
ENST00000481073 XPO1-014 retained_intron Homo_sapiens 0 4028
ENST00000481214 XPO1-020 processed_transcript Homo_sapiens 0 507
ENST00000489954 XPO1-025 retained_intron Homo_sapiens 0 414
ENST00000492182 XPO1-030 retained_intron Homo_sapiens 0 702
ENST00000494468 XPO1-029 processed_transcript Homo_sapiens 0 579
ENST00000495003 XPO1-021 processed_transcript Homo_sapiens 0 374

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