C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H4d
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102968 Hist1h4d-001 ENSMUSG00000061482 10090 + 13:23581598-23581990 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102968
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102968 12.876±6.45 4.633±0.27 3.887±2.67 13.656±11.16 16.535±3.91 26.273±3.93 3.636±0.61 9.949±2.01 29.812±40.01 19.758±2.23 0.371±0.17 19.242±7.82 11.175±15.60 6.435±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 ISS nucleosome
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006334 ISS nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126439 protein_coding Danio_rerio 0 322
ENSDART00000112685 si:ch211-113a14.10-201 protein_coding Danio_rerio 0 311
ENSDART00000128059 protein_coding Danio_rerio 0 300
ENST00000355057 HIST1H4J-001 protein_coding Homo_sapiens 0 405
ENST00000358064 HIST4H4-001 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000377745 HIST1H4B-001 protein_coding Homo_sapiens 0 294
ENST00000539745 HIST4H4-002 protein_coding Homo_sapiens 0 298
ENST00000611927 HIST1H4K-001 protein_coding Homo_sapiens 0 403
ENST00000615353 HIST1H4I-001 protein_coding Homo_sapiens 0 390
ENST00000618305 HIST1H4L-001 protein_coding Homo_sapiens 0 351

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