C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H4b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377745 HIST1H4B-001 ENSG00000278705 9606 - 6:26026815-26027252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000377745
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000377745 0.233±0.00 0.122±0.00 1.557±0.00 1.335±1.26 3.251±3.12 11.444±0.00 2.303±0.00 1.812±1.55 8.042±0.00 9.810±0.00 0.706±0.00 4.557±5.02 0.255±0.06 0.678±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102977 Hist1h4i-001 protein_coding Mus_musculus 0 315
ENSMUST00000102979 Hist1h4n-001 protein_coding Mus_musculus 0 302
ENSMUST00000104941 Hist1h4m-001 protein_coding Mus_musculus 0 302
ENSMUST00000102972 Hist1h4h-001 protein_coding Mus_musculus 0 300
ENSMUST00000102968 Hist1h4d-001 protein_coding Mus_musculus 0 294
ENSDART00000122878 HIST1H4D-201 protein_coding Danio_rerio 0 294
ENSDART00000127745 HIST1H4I (1 of 2)-201 protein_coding Danio_rerio 0 294
ENSMUST00000102964 Hist1h4a-001 protein_coding Mus_musculus 0 289
ENSMUST00000102971 Hist1h4f-001 protein_coding Mus_musculus 0 287
ENSMUST00000102965 Hist1h4b-001 protein_coding Mus_musculus 0 283
ENSDART00000128547 protein_coding Danio_rerio 0 283
ENSMUST00000102983 Hist1h4k-001 protein_coding Mus_musculus 0 278
ENSDART00000112196 HIST1H4K-001 protein_coding Danio_rerio 0 278
ENSDART00000125440 HIST2H4A-001 protein_coding Danio_rerio 0 278
ENSMUST00000102967 Hist1h4c-001 protein_coding Mus_musculus 0 276
ENSDART00000111724 HIST1H4C-001 protein_coding Danio_rerio 0 272
ENSDART00000128564 si:ch211-113a14.26-001 protein_coding Danio_rerio 0 272
ENSMUST00000087714 Hist1h4j-001 protein_coding Mus_musculus 0 267
ENSDART00000121838 HIST1H4H-001 protein_coding Danio_rerio 0 255
ENSDART00000121786 si:ch211-113a14.6-001 protein_coding Danio_rerio 0 250

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