C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 4, H4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539745 HIST4H4-002 ENSG00000197837 9606 - 12:14770555-14771131 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000539745
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000539745 0.532±0.00 3.082±0.00 2.943±2.18 3.499±0.00 6.182±5.83 0.657±0.11 3.532±0.00 4.581±4.33 6.466±0.00 1.234±0.00 11.526±0.00 0.479±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000278 TAS mitotic cell cycle
GO:0000723 TAS telomere maintenance
GO:0000786 TAS:IEA nucleosome
GO:0003677 TAS:IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 TAS nucleosome assembly
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0006336 IDA DNA replication-independent nucleosome assembly
GO:0006352 IEA DNA-templated transcription, initiation
GO:0016020 IDA membrane
GO:0034080 TAS CENP-A containing nucleosome assembly
GO:0035574 TAS histone H4-K20 demethylation
GO:0035575 TAS histone demethylase activity (H4-K20 specific)
GO:0043234 IDA protein complex
GO:0044822 IDA poly(A) RNA binding
GO:0045653 IDA negative regulation of megakaryocyte differentiation
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087714 Hist1h4j-001 protein_coding Mus_musculus 0 309
ENSMUST00000102972 Hist1h4h-001 protein_coding Mus_musculus 0 302
ENSMUST00000102967 Hist1h4c-001 protein_coding Mus_musculus 0 298
ENSMUST00000102968 Hist1h4d-001 protein_coding Mus_musculus 0 298
ENSMUST00000102983 Hist1h4k-001 protein_coding Mus_musculus 0 298
ENSMUST00000102977 Hist1h4i-001 protein_coding Mus_musculus 0 296
ENSMUST00000102971 Hist1h4f-001 protein_coding Mus_musculus 0 296
ENSMUST00000102965 Hist1h4b-001 protein_coding Mus_musculus 0 285
ENSMUST00000102964 Hist1h4a-001 protein_coding Mus_musculus 0 276
ENSDART00000129497 protein_coding Danio_rerio 0 274
ENSDART00000122470 protein_coding Danio_rerio 0 265
ENSDART00000126221 protein_coding Danio_rerio 0 241
ENSDART00000128059 protein_coding Danio_rerio 0 241

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