C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aconitase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102973 Aco1-001 ENSMUSG00000028405 10090 + 4:40143081-40198338 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102973
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102973 43.053±21.32 16.910±2.51 24.933±2.48 13.393±4.95 26.601±9.72 6.655±0.69 6.507±1.26 42.129±4.77 22.772±7.65 11.207±2.44 3.741±0.37 19.789±13.37 36.166±6.56 2.126±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000437 CIL_000437_0002 CGP 4:40143081-40239828

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003994 ISS aconitate hydratase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006099 IEA tricarboxylic acid cycle
GO:0006101 ISS citrate metabolic process
GO:0006417 IMP regulation of translation
GO:0006879 IGI cellular iron ion homeostasis
GO:0009791 IGI post-embryonic development
GO:0010040 ISS response to iron(II) ion
GO:0010468 IGI regulation of gene expression
GO:0030350 ISS iron-responsive element binding
GO:0046872 IEA metal ion binding
GO:0050892 IGI intestinal absorption
GO:0051539 ISS 4 iron, 4 sulfur cluster binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309951 ACO1-001 protein_coding Homo_sapiens 0 3031
ENST00000379923 ACO1-002 protein_coding Homo_sapiens 0 3031
ENST00000541043 ACO1-201 protein_coding Homo_sapiens 0 3031

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