C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aconitase 1, soluble
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379923 ACO1-002 ENSG00000122729 9606 + 9:32384620-32450836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379923
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379923 45.447±0.00 12.019±0.00 6.775±0.00 4.001±1.56 36.352±29.41 10.588±4.11 5.518±1.49 27.386±4.08 22.573±18.09 4.061±0.31 6.968±5.49 9.489±4.30 12.622±2.67 12.482±1.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000437 CIL_000437_0001 CGP 9:32384603-32526324

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 NAS RNA binding
GO:0003994 IEA:IDA aconitate hydratase activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006099 IEA tricarboxylic acid cycle
GO:0006101 IDA citrate metabolic process
GO:0008152 IEA metabolic process
GO:0010040 IEA:IDA response to iron(II) ion
GO:0030350 IDA iron-responsive element binding
GO:0046872 IEA metal ion binding
GO:0051539 IEA:IDA 4 iron, 4 sulfur cluster binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102973 Aco1-001 protein_coding Mus_musculus 0 3031
ENSMUST00000152911 Aco1-002 processed_transcript Mus_musculus 0 486
ENSMUST00000142360 Aco1-004 processed_transcript Mus_musculus 0 316

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