C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Cas scaffolding protein family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103073 Cass4-002 ENSMUSG00000074570 10090 + 2:172393821-172433757 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENSMUST00000103073
Transcript ID Lung
ENSMUST00000103073 3.172±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0002 VISTA 2:172130534-172731364
CIL_0005JF CIL_0005JF_0002 CGP 2:172370681-172433757
CIL_00036G CIL_00036G_0002 CGP 2:172393794-172469908

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007155 IEA cell adhesion
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360314 CASS4-001 protein_coding Homo_sapiens 0 606
ENST00000434344 CASS4-002 protein_coding Homo_sapiens 0 237
ENST00000497244 CASS4-003 retained_intron Homo_sapiens 0 401

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