C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103127 Krt35-001 ENSMUSG00000048013 10090 - 11:100092193-100096225 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungMuscleOvaryPlacentaTestisENSMUST00000103127
Transcript ID Bladder Breast Colon Lung Muscle Ovary Placenta Testis
ENSMUST00000103127 0.024±0.00 0.017±0.00 0.027±0.00 0.037±0.02 0.700±0.00 0.052±0.01 0.003±0.00 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0013 CGP 11:100080848-100096241
CIL_00056U CIL_00056U_0014 CGP 11:100092193-100105626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IEA extracellular space
GO:0005882 IEA intermediate filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225550 KRT37-001 protein_coding Homo_sapiens 0 436
ENST00000225899 KRT32-001 protein_coding Homo_sapiens 0 784
ENST00000246639 KRT35-001 protein_coding Homo_sapiens 0 1604
ENST00000246646 KRT38-001 protein_coding Homo_sapiens 0 490
ENST00000251645 KRT31-001 protein_coding Homo_sapiens 0 859
ENST00000393988 KRT41P-001 unprocessed_pseudogene Homo_sapiens 0 481
ENST00000393989 KRT35-201 protein_coding Homo_sapiens 0 1604
ENST00000394001 KRT34-001 protein_coding Homo_sapiens 0 771
ENST00000571312 RP1-18F17.1-001 protein_coding Homo_sapiens 0 776
ENST00000572799 AC003958.1-001 unprocessed_pseudogene Homo_sapiens 0 481
ENST00000573281 KRT31-001 protein_coding Homo_sapiens 0 859
ENST00000574588 KRT37-001 protein_coding Homo_sapiens 0 436
ENST00000576522 AC004231.7-001 protein_coding Homo_sapiens 0 771

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