C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251645 KRT31-001 ENSG00000094796 9606 - 17:41393724-41397592 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastMuscleOvaryTestisENST00000251645
Transcript ID Adipose Brain Breast Muscle Ovary Testis
ENST00000251645 0.029±0.00 0.285±0.12 0.108±0.00 0.138±0.00 0.087±0.05 0.321±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0008 CGP 17:41346092-41397592
CIL_00056U CIL_00056U_000E CGP 17:41363494-41397592
CIL_00056U CIL_00056U_000D CGP 17:41377650-41397592
CIL_00056U CIL_00056U_0009 CGP 17:41393724-41424523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0008544 TAS epidermis development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007318 Krt31-001 protein_coding Mus_musculus 0 1487
ENSMUST00000018399 Krt33a-001 protein_coding Mus_musculus 0 1367
ENSMUST00000073890 Krt33b-001 protein_coding Mus_musculus 0 1352
ENSMUST00000056362 Krt34-001 protein_coding Mus_musculus 0 1339
ENSMUST00000103127 Krt35-001 protein_coding Mus_musculus 0 859
ENSMUST00000107416 Krt36-001 protein_coding Mus_musculus 0 813
ENSMUST00000074253 Krt40-001 protein_coding Mus_musculus 0 442
ENSMUST00000138756 Krt33a-002 processed_transcript Mus_musculus 0 372
ENSMUST00000107443 Krt40-002 protein_coding Mus_musculus 0 243
ENSMUST00000173988 Krt35-002 retained_intron Mus_musculus 0 230

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